VAT – annual accounting scheme

The VAT Annual Accounting Scheme is designed to help small businesses reduce paperwork and manage cash flow more effectively. Instead of submitting four VAT returns each year, eligible businesses submit just one VAT return annually while making instalment payments throughout the year.Capital Gains Tax applies when you sell or dispose of certain assets and make a profit. Careful planning can significantly reduce the tax payable by using available reliefs and exemptions correctly.

At Applegrow, we help individuals and business owners understand capital gains tax rules and structure disposals in a tax-efficient way.

What Is the VAT Annual Accounting Scheme?

Under the Annual Accounting Scheme:

  • Only one VAT return is submitted each year

  • VAT is paid in monthly or quarterly instalments based on estimated liability

  • A balancing payment is made when the annual VAT return is submitted

The scheme is designed to simplify VAT administration, improve budgeting, and reduce compliance pressure.

Who Can Join the Scheme?

A business can apply to join if:

  • Expected taxable turnover in the next 12 months does not exceed £1,350,000

  • All VAT returns are up to date

  • The business is not part of a VAT group

HMRC must approve the application before the scheme can be used.

How VAT Payments Work

Businesses Registered for 12 Months or More

VAT is paid based on the previous year’s VAT liability, either as:

  • Nine monthly instalments of 10%, or

  • Three quarterly instalments of 25%

The remaining balance is paid when the annual VAT return is submitted, which is due two months after the end of the accounting period.

Newer VAT-Registered Businesses

If the business has been VAT registered for less than 12 months:

  • Instalments are based on an estimated VAT liability

  • HMRC confirms the instalment amounts

Changing Instalments

If VAT liability increases or decreases significantly during the year, businesses can apply to HMRC to adjust instalment amounts. This helps prevent overpayment or unexpected balances.

Annual Accounting Period

  • The accounting period usually starts at the beginning of a VAT quarter

  • Applications made late in a quarter may start from the next quarter

  • HMRC confirms the official start date

Leaving the Scheme

A business may leave the scheme:

  • Voluntarily at any time

  • Automatically if taxable turnover exceeds £1,600,000

Once turnover exceeds this limit, the business must revert to standard VAT reporting.

Advantages of the Scheme

  • Only one VAT return per year

  • Easier cash flow planning with predictable payments

  • Extra time to submit the VAT return and pay the balance

  • Simplifies VAT calculations for retail schemes or partial exemption cases

Potential Disadvantages

  • Instalments may be higher than actual VAT due if turnover falls

  • HMRC must be informed if VAT liability changes significantly

  • Poor estimates can lead to a large balancing payment

Careful monitoring is essential to avoid surprises.

How Applegrow Can Help

Choosing the right VAT scheme can make a significant difference to your cash flow and compliance workload.

Applegrow can assist with:

  • Assessing whether the Annual Accounting Scheme suits your business

  • Handling applications and approvals

  • Monitoring instalments and VAT liabilities

  • Ensuring timely and accurate annual VAT submissions

Our aim is to simplify VAT management while keeping your business fully compliant.

Need VAT Advice?

Get expert guidance to maximise VAT recovery and stay compliant.